4FC4 FNT family ion channel date
authors Lue, W., Schwarzer, N., Du, J., Gerbig-Smentek, E., Andrade, S.L.A., Einsle, O.
compound source
symmetry
R_factor
R_Free 0.23631
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand BOG enzyme
Gene STM474
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, I, G


Primary referenceStructural and functional characterization of the nitrite channel NirC from Salmonella typhimurium., Lu W, Schwarzer NJ, Du J, Gerbig-Smentek E, Andrade SL, Einsle O, Proc Natl Acad Sci U S A. 2012 Nov 6;109(45):18395-400. doi:, 10.1073/pnas.1210793109. Epub 2012 Oct 22. PMID:23090993
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (770 Kb) [Save to disk]
  • Biological Unit Coordinates (4fc4.pdb1.gz) 384 Kb
  • Biological Unit Coordinates (4fc4.pdb2.gz) 381 Kb
  • LPC: Ligand-Protein Contacts for 4FC4
  • CSU: Contacts of Structural Units for 4FC4
  • Structure Factors (2014 Kb)
  • Retrieve 4FC4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FC4 from S2C, [Save to disk]
  • Re-refined 4fc4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FC4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FC4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FC4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fc4] [4fc4_F] [4fc4_H] [4fc4_G] [4fc4_I] [4fc4_J] [4fc4_B] [4fc4_E] [4fc4_D] [4fc4_C] [4fc4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4FC4
  • Community annotation for 4FC4 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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