4FDL Crystal structure of Caspase-7 date 2012-05-28
authors Kabaleeswaran, V.
compound source
symmetry
R_factor
R_Free 0.2394
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA Class of Allosteric Caspase Inhibitors Identified by High-Throughput Screening., Feldman T, Kabaleeswaran V, Jang SB, Antczak C, Djaballah H, Wu H, Jiang X, Mol Cell. 2012 Jul 10. PMID:22795132
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (4fdl.pdb1.gz) 77 Kb
  • CSU: Contacts of Structural Units for 4FDL
  • Structure Factors (164 Kb)
  • Retrieve 4FDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FDL from S2C, [Save to disk]
  • Re-refined 4fdl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FDL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FDL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fdl_A] [4fdl_B] [4fdl]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FDL: [CASc ] by SMART
  • Other resources with information on 4FDL
  • Community annotation for 4FDL at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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