4FDO Mycobacterium tuberculosis DprE1 in complex with CT319 date 2012-05-29
authors Batt, S.M., Besra, G.S., Futterer, K.
compound source
symmetry
R_factor
R_Free 0.2048
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand 0T5, FAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of inhibition of Mycobacterium tuberculosis DprE1 by benzothiazinone inhibitors., Batt SM, Jabeen T, Bhowruth V, Quill L, Lund PA, Eggeling L, Alderwick LJ, Futterer K, Besra GS, Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11354-9. Epub 2012 Jun 25. PMID:22733761
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (4fdo.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 4FDO
  • CSU: Contacts of Structural Units for 4FDO
  • Structure Factors (988 Kb)
  • Retrieve 4FDO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FDO from S2C, [Save to disk]
  • Re-refined 4fdo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FDO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FDO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FDO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fdo_A] [4fdo]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4FDO
  • Community annotation for 4FDO at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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