4FLL Human MetAP1 with bengamide analog YZ6, in Mn form date
authors Ye, Q.Z., Xu, W.
compound source
symmetry
R_factor
R_Free 0.2129
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand MN, NA, YZ6 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Analysis of Bengamide Derivatives as Inhibitors of Methionine Aminopeptidases., Xu W, Lu JP, Ye QZ, J Med Chem. 2012 Sep 14. PMID:22913487
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (4fll.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4FLL
  • CSU: Contacts of Structural Units for 4FLL
  • Structure Factors (1187 Kb)
  • Retrieve 4FLL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FLL from S2C, [Save to disk]
  • Re-refined 4fll structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FLL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FLL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FLL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fll_A] [4fll]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4FLL
  • Community annotation for 4FLL at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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