4FMQ Crystal structure of human ERK2 complexed with a MAPK docking peptide date 2012-06-18
authors Gogl, G., Toeroe, I., Remenyi, A.
compound source
symmetry
R_factor
R_Free 0.2244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand ANP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • chemical synaptic transmissi...

    • Primary referenceSpecificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove., Garai A, Zeke A, Gogl G, Toro I, Fordos F, Blankenburg H, Barkai T, Varga J, Alexa A, Emig D, Albrecht M, Remenyi A, Sci Signal. 2012 Oct 9;5(245):ra74. doi: 10.1126/scisignal.2003004. PMID:23047924
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4fmq.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 4FMQ
  • CSU: Contacts of Structural Units for 4FMQ
  • Structure Factors (651 Kb)
  • Retrieve 4FMQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FMQ from S2C, [Save to disk]
  • Re-refined 4fmq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FMQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FMQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FMQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fmq_A] [4fmq_B] [4fmq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FMQ: [S_TKc ] by SMART
    • Other resources with information on 4FMQ
  • Community annotation for 4FMQ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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