4G13 Crystal structure of samarosporin I at 100K date
authors Gessmann, R., Axford, D., Petratos, K.
compound source
symmetry
R_factor
R_Free 0.081
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 0.80
ligand ACE, AIB, DIV, HYP, PHL enzyme
Primary referenceThe crystal structure of samarosporin I at atomic resolution., Gessmann R, Axford D, Evans G, Bruckner H, Petratos K, J Pept Sci. 2012 Nov;18(11):678-84. doi: 10.1002/psc.2454. Epub 2012 Sep 28. PMID:23019149
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (12 Kb) [Save to disk]
  • Biological Unit Coordinates (4g13.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 4G13
  • CSU: Contacts of Structural Units for 4G13
  • Structure Factors (70 Kb)
  • Retrieve 4G13 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4G13 from S2C, [Save to disk]
  • Re-refined 4g13 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4G13 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4G13
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4G13, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4g13_A] [4g13]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4G13
  • Community annotation for 4G13 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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