4G1E	Crystal structure of integrin alpha V beta 3 with coil-coiled tag.	date	2012-07-10
authors	Dong, X., Mi, L., Zhu, J., Wang, W., Luo, B., Springer, T.A.
compound		source
symmetry		R_factor R_Free 0.2608
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.00
ligand	BMA, CA, CL, MAN, NAG, NI, SO4	enzyme
Gene Ontology	Chain Function Process Component A B smooth muscle cell migration...
Primary reference	alpha(V)beta(3) Integrin Crystal Structures and Their Functional Implications., Dong X, Mi LZ, Zhu J, Wang W, Hu P, Luo BH, Springer TA, Biochemistry. 2012 Nov 6;51(44):8814-28. doi: 10.1021/bi300734n. Epub 2012 Oct, 29. PMID:23106217

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (586 Kb) [Save to disk] Biological Unit Coordinates (4g1e.pdb1.gz) 572 Kb Biological Unit Coordinates (4g1e.pdb2.gz) 479 Kb Biological Unit Coordinates (4g1e.pdb3.gz) 1136 Kb LPC: Ligand-Protein Contacts for 4G1E CSU: Contacts of Structural Units for 4G1E Structure Factors (631 Kb) Retrieve 4G1E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4G1E from S2C, [Save to disk] Re-refined 4g1e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4G1E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4G1E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4G1E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4g1e_A] [4g1e_B] [4g1e] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4G1E: [INB] [Int_alpha] [Integrin_B_tail] [PSI] [VWA ] by SMART

Other resources with information on 4G1E

Community annotation for 4G1E at PDBWiki (http://pdbwiki.org)

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