4GCJ CDK2 in complex with inhibitor RC-3-89 date 2012-07-30
authors Betzi, S., Alam, R., Han, H., Becker, A., Schonbrunn, E.
compound source
symmetry
R_factor
R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.42
ligand EDO, X64 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDevelopment of Highly Potent and Selective Diaminothiazole Inhibitors of Cyclin-Dependent Kinases., Schonbrunn E, Betzi S, Alam R, Martin MP, Becker A, Han H, Francis R, Chakrasali R, Jakkaraj S, Kazi A, Sebti SM, Cubitt CL, Gebhard AW, Hazlehurst LA, Tash JS, Georg GI, J Med Chem. 2013 May 6. PMID:23600925
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (4gcj.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4GCJ
  • CSU: Contacts of Structural Units for 4GCJ
  • Structure Factors (450 Kb)
  • Retrieve 4GCJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GCJ from S2C, [Save to disk]
  • Re-refined 4gcj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GCJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GCJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GCJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gcj] [4gcj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GCJ: [S_TKc ] by SMART
    • Other resources with information on 4GCJ
  • Community annotation for 4GCJ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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