4GLM Crystal structure of the SH3 Domain of DNMBP protein [Homo sapiens] date 2012-08-14
authors Dong, A., Guan, X., Huang, H., Tempel, W., Gu, J., Sidhu, S., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Tong, Y., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2587
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand UNX enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (4glm.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (4glm.pdb2.gz) 22 Kb
  • Biological Unit Coordinates (4glm.pdb3.gz) 20 Kb
  • Biological Unit Coordinates (4glm.pdb4.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 4GLM
  • CSU: Contacts of Structural Units for 4GLM
  • Structure Factors (875 Kb)
  • Retrieve 4GLM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GLM from S2C, [Save to disk]
  • Re-refined 4glm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GLM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GLM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GLM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4glm_A] [4glm_C] [4glm] [4glm_D] [4glm_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GLM: [SH3 ] by SMART
  • Other resources with information on 4GLM
  • Community annotation for 4GLM at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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