4GQB Crystal Structure of the human PRMT5:MEP50 Complex date 2012-08-22
authors Antonysamy, S., Bonday, Z., Campbell, R., Doyle, B., Druzina, Z., Gheyi, T., Han, B., Jungheim, L.N., Qian, Y., Rauch, C., Russell, M., Sauder, J.M., Wasserman, S.R., Weichert, K., Willard, F.S., Zhang, A., Emtage, S.
compound source
symmetry
R_factor
R_Free 0.2224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.06
ligand 0XU, ACE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • transcription corepressor ac...
  • protein-arginine omega-N sym...


    • B
  • ligand-dependent nuclear rec...


    • C


    Primary referenceCrystal structure of the human PRMT5:MEP50 complex., Antonysamy S, Bonday Z, Campbell RM, Doyle B, Druzina Z, Gheyi T, Han B, Jungheim LN, Qian Y, Rauch C, Russell M, Sauder JM, Wasserman SR, Weichert K, Willard FS, Zhang A, Emtage S, Proc Natl Acad Sci U S A. 2012 Oct 15. PMID:23071334
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (315 Kb) [Save to disk]
  • Biological Unit Coordinates (4gqb.pdb1.gz) 1226 Kb
  • LPC: Ligand-Protein Contacts for 4GQB
  • CSU: Contacts of Structural Units for 4GQB
  • Structure Factors (593 Kb)
  • Retrieve 4GQB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GQB from S2C, [Save to disk]
  • Re-refined 4gqb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GQB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GQB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GQB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gqb_B] [4gqb_A] [4gqb] [4gqb_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GQB: [WD40 ] by SMART
    • Other resources with information on 4GQB
  • Community annotation for 4GQB at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science