4GS6 Irreversible Inhibition of TAK1 Kinase by 5Z-7-Oxozeaenol date
authors Larsen, N.A., Ferguson, A.D., Wu, J.
compound source
symmetry
R_factor
R_Free 0.2451
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand 1FM, EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMechanism and In Vitro Pharmacology of TAK1 Inhibition by (5Z)-7-Oxozeaenol., Wu J, Powell F, Larsen NA, Lai Z, Byth KF, Read J, Gu RF, Roth M, Toader D, Saeh JC, Chen H, ACS Chem Biol. 2013 Jan 7. PMID:23272696
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (4gs6.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 4GS6
  • CSU: Contacts of Structural Units for 4GS6
  • Structure Factors (543 Kb)
  • Retrieve 4GS6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GS6 from S2C, [Save to disk]
  • Re-refined 4gs6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GS6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GS6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GS6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gs6] [4gs6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GS6: [STYKc ] by SMART
  • Other resources with information on 4GS6
  • Community annotation for 4GS6 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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