4GXO Crystal structure of Staphylococcus aureus protein SarZ mutant C13E date 2012-09-04
authors Sun, F., Ding, Y., Ji, Q., Liang, Z., Deng, X., Wong, C.C., Yi, C., Zhang, L., Xie, S., Alvarez, S., Hicks, L.M., Luo, C., Jiang, H., Lan, L., He, C.
compound source
symmetry
R_factor
R_Free 0.27020
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
ligand GOL enzyme
Gene NWMN
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProtein cysteine phosphorylation of SarA/MgrA family transcriptional regulators mediates bacterial virulence and antibiotic resistance., Sun F, Ding Y, Ji Q, Liang Z, Deng X, Wong CC, Yi C, Zhang L, Xie S, Alvarez S, Hicks LM, Luo C, Jiang H, Lan L, He C, Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15461-6. Epub 2012 Aug 27. PMID:22927394
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4gxo.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 4GXO
  • CSU: Contacts of Structural Units for 4GXO
  • Structure Factors (271 Kb)
  • Retrieve 4GXO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GXO from S2C, [Save to disk]
  • Re-refined 4gxo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GXO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GXO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GXO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gxo] [4gxo_A] [4gxo_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GXO: [HTH_MARR ] by SMART
  • Other resources with information on 4GXO
  • Community annotation for 4GXO at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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