4H0N Crystal structure of Spodoptera frugiperda DNMT2 E260A/E261A/K263A mutant date 2012-09-09
authors Li, S., Du, J., Yang, H., Yin, J., Zhong, J., Ding, J.
compound source
symmetry
R_factor
R_Free 0.2557
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.71
ligand CA, SAH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceFunctional and structural characterization of DNMT2 from Spodoptera frugiperda., Li S, Du J, Yang H, Yin J, Ding J, Zhong J, J Mol Cell Biol. 2012 Oct 25. PMID:23103599
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (455 Kb) [Save to disk]
  • Biological Unit Coordinates (4h0n.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (4h0n.pdb2.gz) 114 Kb
  • Biological Unit Coordinates (4h0n.pdb3.gz) 115 Kb
  • Biological Unit Coordinates (4h0n.pdb4.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 4H0N
  • CSU: Contacts of Structural Units for 4H0N
  • Structure Factors (506 Kb)
  • Retrieve 4H0N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H0N from S2C, [Save to disk]
  • Re-refined 4h0n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4H0N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4H0N
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H0N, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h0n_B] [4h0n_D] [4h0n_C] [4h0n] [4h0n_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4H0N
  • Community annotation for 4H0N at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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