4HJO Crystal structure of the inactive EGFR tyrosine kinase domain with erlotinib date 2012-10-13
authors Park, J.H., Lemmon, M.A.
compound source
symmetry
R_factor
R_Free 0.25337
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.75
ligand AQ4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceErlotinib binds both inactive and active conformations of the EGFR tyrosine kinase domain., Park JH, Liu Y, Lemmon MA, Radhakrishnan R, Biochem J. 2012 Oct 29. PMID:23101586
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (4hjo.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 4HJO
  • CSU: Contacts of Structural Units for 4HJO
  • Structure Factors (149 Kb)
  • Retrieve 4HJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HJO from S2C, [Save to disk]
  • Re-refined 4hjo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HJO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HJO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hjo_A] [4hjo]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HJO: [TyrKc ] by SMART
  • Other resources with information on 4HJO
  • Community annotation for 4HJO at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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