4HWL Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-7 DMPC Bicelle date
authors Lee, S., Stout, C.D., Zhang, Q.
compound source
symmetry
R_factor
R_Free 0.17183
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand GOL, HEX, HP6, RET enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • ion channel activity


  • Primary referenceSteroid-based facial amphiphiles for stabilization and crystallization of membrane proteins., Lee SC, Bennett BC, Hong WX, Fu Y, Baker KA, Marcoux J, Robinson CV, Ward AB, Halpert JR, Stevens RC, Stout CD, Yeager MJ, Zhang Q, Proc Natl Acad Sci U S A. 2013 Mar 11. PMID:23479627
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (4hwl.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (4hwl.pdb2.gz) 37 Kb
  • Biological Unit Coordinates (4hwl.pdb3.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 4HWL
  • CSU: Contacts of Structural Units for 4HWL
  • Structure Factors (486 Kb)
  • Retrieve 4HWL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HWL from S2C, [Save to disk]
  • Re-refined 4hwl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HWL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HWL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HWL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hwl_B] [4hwl] [4hwl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HWL: [Bac_rhodopsin ] by SMART
  • Other resources with information on 4HWL
  • Community annotation for 4HWL at PDBWiki (http://pdbwiki.org)

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