4HZF structure of the wild type Catabolite gene Activator Protein date 2012-11-15
authors Pohl, E., Townsend, P.D., Rodgers, T., Burnell, D., McLeish, T.C.B., Wilson, M.R., Cann, M.
compound source
symmetry
R_factor
R_Free 0.24152
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.48
ligand CMP, GOL, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceModulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors., Rodgers TL, Townsend PD, Burnell D, Jones ML, Richards SA, McLeish TC, Pohl E, Wilson MR, Cann MJ, PLoS Biol. 2013 Sep;11(9):e1001651. doi: 10.1371/journal.pbio.1001651. Epub 2013 , Sep 10. PMID:24058293
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (4hzf.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 4HZF
  • CSU: Contacts of Structural Units for 4HZF
  • Structure Factors (1073 Kb)
  • Retrieve 4HZF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HZF from S2C, [Save to disk]
  • Re-refined 4hzf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HZF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HZF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HZF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hzf] [4hzf_A] [4hzf_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4HZF: [HTH_CRP] [cNMP ] by SMART
    • Other resources with information on 4HZF
  • Community annotation for 4HZF at PDBWiki (http://pdbwiki.org)

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