4I51 Methyltransferase domain of HUMAN EUCHROMATIC HISTONE METHYLTRANSFERASE 1, mutant Y1211A date 2012-11-28
authors Dong, A., Zeng, H., Walker, J.R., Islam, K., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Lou, M., Min, J., Wu, H., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand GOL, LDH, SAH, UNX, ZN enzyme
note 4I51 supersedes 4H4H
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDefining efficient enzyme-cofactor pairs for bioorthogonal profiling of protein methylation., Islam K, Chen Y, Wu H, Bothwell IR, Blum GJ, Zeng H, Dong A, Zheng W, Min J, Deng H, Luo M, Proc Natl Acad Sci U S A. 2013 Oct 15;110(42):16778-83. doi:, 10.1073/pnas.1216365110. Epub 2013 Sep 30. PMID:24082136
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (4i51.pdb1.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 4I51
  • CSU: Contacts of Structural Units for 4I51
  • Structure Factors (639 Kb)
  • Retrieve 4I51 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I51 from S2C, [Save to disk]
  • Re-refined 4i51 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4I51 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4I51
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I51, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i51_B] [4i51_A] [4i51_K] [4i51_D] [4i51_C] [4i51]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4I51: [PreSET] [SET ] by SMART
    • Other resources with information on 4I51
  • Community annotation for 4I51 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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