4I8X	Crystal structure of rabbit LDHA in complex with AP27460	date
authors	Zhou, T., Stephan, Z.G., Kohlmann, A., Li, F., Commodore, L., Greenfield, M.T., Zhu, X., Dalgarno, D.C.
compound		source
symmetry		R_factor R_Free 0.2358
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.23
ligand	6P3	enzyme
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Fragment Growing and Linking Lead to Novel Nanomolar Lactate Dehydrogenase Inhibitors., Kohlmann A, Zech SG, Li F, Zhou T, Squillace RM, Commodore L, Greenfield MT, Lu X, Miller DP, Huang WS, Qi J, Thomas RM, Wang Y, Zhang S, Dodd R, Liu S, Xu R, Xu Y, Miret JJ, Rivera V, Clackson T, Shakespeare WC, Zhu X, Dalgarno DC, J Med Chem. 2013 Jan 9. PMID:23302067

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (416 Kb) [Save to disk] Biological Unit Coordinates (4i8x.pdb1.gz) 208 Kb Biological Unit Coordinates (4i8x.pdb2.gz) 209 Kb LPC: Ligand-Protein Contacts for 4I8X CSU: Contacts of Structural Units for 4I8X Structure Factors (1847 Kb) Retrieve 4I8X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4I8X from S2C, [Save to disk] Re-refined 4i8x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4I8X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4I8X

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4I8X, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4i8x_A] [4i8x_H] [4i8x_C] [4i8x] [4i8x_F] [4i8x_E] [4i8x_D] [4i8x_B] [4i8x_G] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4I8X

Community annotation for 4I8X at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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