4IN5 (M)L214G mutant of the Rhodobacter sphaeroides Reaction Center date
authors Saer, R.G., Hardjasa, A., Murphy, M.E., Beatty, J.T.
compound source
symmetry
R_factor
R_Free 0.20619
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand BCL, BPH, FE, GOL, HTO, K, LDA, PC1, PO4, SPO, U10 enzyme
Gene
Ontology
ChainFunctionProcessComponent
H
  • electron transporter, transf...


    • L


    M


    Primary referenceRole of Rhodobacter sphaeroides Photosynthetic Reaction Center Residue M214 in the Composition, Absorbance Properties, and Conformations of HA and BA Cofactors., Saer RG, Hardjasa A, Rosell FI, Mauk AG, Murphy ME, Beatty JT, Biochemistry. 2013 Apr 2;52(13):2206-17. doi: 10.1021/bi400207m. Epub 2013 Mar, 25. PMID:23480277
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (4in5.pdb1.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 4IN5
  • CSU: Contacts of Structural Units for 4IN5
  • Structure Factors (1540 Kb)
  • Retrieve 4IN5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IN5 from S2C, [Save to disk]
  • Re-refined 4in5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IN5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IN5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IN5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4in5] [4in5_M] [4in5_H] [4in5_L]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IN5
  • Community annotation for 4IN5 at PDBWiki (http://pdbwiki.org)

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