4ISF Human glucokinase in complex with novel activator (2S)-3-cyclohexyl-2-(6-fluoro-2,4-dioxo-1,4-dihydroquinazolin-3(2H)-yl)-N-(1,3-thiazol-2-yl)propanamide date 2013-01-16
authors Hosfield, D., Skene, R.J.
compound source
symmetry
R_factor
R_Free 0.25834
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.09
ligand 1FX, GLC, IOD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign, synthesis and SAR of novel glucokinase activators., Cheruvallath ZS, Gwaltney SL 2nd, Sabat M, Tang M, Feng J, Wang H, Miura J, Guntupalli P, Jennings A, Hosfield D, Lee B, Wu Y, Bioorg Med Chem Lett. 2013 Apr 1;23(7):2166-71. doi: 10.1016/j.bmcl.2013.01.093. , Epub 2013 Feb 4. PMID:23434031
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (4isf.pdb1.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 4ISF
  • CSU: Contacts of Structural Units for 4ISF
  • Structure Factors (387 Kb)
  • Retrieve 4ISF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ISF from S2C, [Save to disk]
  • Re-refined 4isf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ISF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ISF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ISF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4isf_A] [4isf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ISF
  • Community annotation for 4ISF at PDBWiki (http://pdbwiki.org)

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