4ITE	Crystal structure of the human vitamin D receptor ligand binding domain complexed with 1alpha,25-Dihydroxy-2alpha-[2-(2H-tetrazol-2-yl)ethyl]vitamin D3	date
authors	Kakuda, S., Takimoto-Kamimura, M.
compound		source
symmetry		R_factor R_Free 0.24836
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.49
ligand	TEY	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Synthesis of 2alpha-heteroarylalkyl active vitamin d3 with therapeutic effect on enhancing bone mineral density in vivo., Matsuo M, Hasegawa A, Takano M, Saito H, Kakuda S, Chida T, Takagi K, Ochiai E, Horie K, Harada Y, Takimoto-Kamimura M, Takenouchi K, Sawada D, Kittaka A, ACS Med Chem Lett. 2013 May 28;4(7):671-4. doi: 10.1021/ml400098w. eCollection, 2013 Jul 11. PMID:24900728

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (4ite.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 4ITE CSU: Contacts of Structural Units for 4ITE Structure Factors (160 Kb) Retrieve 4ITE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4ITE from S2C, [Save to disk] Re-refined 4ite structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ITE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ITE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4ITE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ite] [4ite_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4ITE: [HOLI ] by SMART

Other resources with information on 4ITE

Community annotation for 4ITE at PDBWiki (http://pdbwiki.org)

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