4IV2 Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Dynamic WAY-derivative, 5a date
authors Nwachukwu, J.C., Srinivasan, S., Parent, A.A., Cavett, V., Nowak, J., Hughes, T.S., Kojetin, D.J., Katzenellenbogen, J.A., Nettles, K.W.
compound source
symmetry
R_factor
R_Free 0.2256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.14
ligand 1GR enzyme
Primary referenceLigand-binding dynamics rewire cellular signaling via estrogen receptor-alpha., Srinivasan S, Nwachukwu JC, Parent AA, Cavett V, Nowak J, Hughes TS, Kojetin DJ, Katzenellenbogen JA, Nettles KW, Nat Chem Biol. 2013 May;9(5):326-32. doi: 10.1038/nchembio.1214. Epub 2013 Mar, 24. PMID:23524984
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (4iv2.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 4IV2
  • CSU: Contacts of Structural Units for 4IV2
  • Structure Factors (154 Kb)
  • Retrieve 4IV2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IV2 from S2C, [Save to disk]
  • Re-refined 4iv2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IV2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IV2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IV2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4iv2_A] [4iv2_D] [4iv2_C] [4iv2] [4iv2_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4IV2: [HOLI ] by SMART
    • Other resources with information on 4IV2
  • Community annotation for 4IV2 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science