4IWN Crystal structure of a putative methyltransferase CmoA in complex with a novel SAM derivative date 2013-01-24
authors Aller, P., Lobley, C.M., Byrne, R.T., Antson, A.A., Waterman, D.G.
compound source
symmetry
R_factor
R_Free 0.2313
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.73
ligand GEK, MPD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceS-Adenosyl-S-carboxymethyl-L-homocysteine: a novel cofactor found in the putative tRNA-modifying enzyme CmoA., Byrne RT, Whelan F, Aller P, Bird LE, Dowle A, Lobley CM, Reddivari Y, Nettleship JE, Owens RJ, Antson AA, Waterman DG, Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):1090-8. doi:, 10.1107/S0907444913004939. Epub 2013 May 15. PMID:23695253
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk]
  • Biological Unit Coordinates (4iwn.pdb1.gz) 152 Kb
  • LPC: Ligand-Protein Contacts for 4IWN
  • CSU: Contacts of Structural Units for 4IWN
  • Structure Factors (740 Kb)
  • Retrieve 4IWN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IWN from S2C, [Save to disk]
  • Re-refined 4iwn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4IWN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4IWN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IWN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4iwn_B] [4iwn_A] [4iwn]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4IWN
  • Community annotation for 4IWN at PDBWiki (http://pdbwiki.org)

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