4IZA Structure of Dually Phosphorylated ERK2 bound to the PEA-15 Death Effector Domain date 2013-01-29
authors Mace, P.D., Robinson, H., Riedl, S.J.
compound source
symmetry
R_factor
R_Free 0.24261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.93
ligand PTR, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • chemical synaptic transmissi...

    • B


    Primary referenceStructure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK., Mace PD, Wallez Y, Egger MF, Dobaczewska MK, Robinson H, Pasquale EB, Riedl SJ, Nat Commun. 2013 Apr 9;4:1681. doi: 10.1038/ncomms2687. PMID:23575685
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (4iza.pdb1.gz) 83 Kb
  • Biological Unit Coordinates (4iza.pdb2.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 4IZA
  • CSU: Contacts of Structural Units for 4IZA
  • Structure Factors (1001 Kb)
  • Retrieve 4IZA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IZA from S2C, [Save to disk]
  • Re-refined 4iza structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IZA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IZA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IZA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4iza_A] [4iza_C] [4iza] [4iza_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4IZA: [DED] [S_TKc ] by SMART
    • Other resources with information on 4IZA
  • Community annotation for 4IZA at PDBWiki (http://pdbwiki.org)

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