4J72 Crystal Structure of polyprenyl-phosphate N-acetyl hexosamine 1-phosphate transferase date 2013-02-12
authors Lee, S.Y., Chung, B.C., Gillespie, R.A., Kwon, D.Y., Guan, Z., Zhou, P., Hong, J.
compound source
symmetry
R_factor
R_Free 0.2649
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
ligand MG, NI enzyme
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of MraY, an essential membrane enzyme for bacterial cell wall synthesis., Chung BC, Zhao J, Gillespie RA, Kwon DY, Guan Z, Hong J, Zhou P, Lee SY, Science. 2013 Aug 30;341(6149):1012-6. doi: 10.1126/science.1236501. PMID:23990562
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (4j72.pdb1.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 4J72
  • CSU: Contacts of Structural Units for 4J72
  • Structure Factors (328 Kb)
  • Retrieve 4J72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J72 from S2C, [Save to disk]
  • Re-refined 4j72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4J72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4J72
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J72, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j72_A] [4j72] [4j72_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4J72
  • Community annotation for 4J72 at PDBWiki (http://pdbwiki.org)

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