4JVJ	Crystal structure of human FPPS in complex with magnesium, CL01131, and sulfate	date	2013-03-25
authors	Park, J., Leung, C.Y., Tsantrizos, Y.S., Berghuis, A.M.
compound		source
symmetry		R_factor R_Free 0.28828
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.80
ligand	1MV, MG, SO4	enzyme
Gene Ontology	Chain Function Process Component F
Primary reference	Thienopyrimidine Bisphosphonate (ThPBP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Optimization and Characterization of the Mode of Inhibition., Leung CY, Park J, De Schutter JW, Sebag M, Berghuis AM, Tsantrizos YS, J Med Chem. 2013 Oct 3. PMID:23998921

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (4jvj.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 4JVJ CSU: Contacts of Structural Units for 4JVJ Structure Factors (156 Kb) Retrieve 4JVJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4JVJ from S2C, [Save to disk] Re-refined 4jvj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4JVJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4JVJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4JVJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4jvj_F] [4jvj] SWISS-PROT database: Domain organization of by SWISSPFAM

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