4JZ1	Crystal Structure of Matriptase in complex with Inhibitor	date	2013-04-02
authors	Subramanya, H.S., Ravi, B.C., Ashok, K.N., Chakshusmathi, G., Ramesh, K.S.
compound		source
symmetry		R_factor R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.90
ligand	F4D	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of Pyridyl Bis(oxy)dibenzimidamide Derivatives as Selective Matriptase Inhibitors., Goswami R, Mukherjee S, Wohlfahrt G, Ghadiyaram C, Nagaraj J, Chandra BR, Sistla RK, Satyam LK, Samiulla DS, Moilanen A, Subramanya HS, Ramachandra M, ACS Med Chem Lett. 2013 Oct 7;4(12):1152-7. doi: 10.1021/ml400213v. eCollection, 2013 Dec 12. PMID:24900621

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (4jz1.pdb1.gz) 39 Kb LPC: Ligand-Protein Contacts for 4JZ1 CSU: Contacts of Structural Units for 4JZ1 Structure Factors (280 Kb) Retrieve 4JZ1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4JZ1 from S2C, [Save to disk] Re-refined 4jz1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4JZ1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4JZ1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4JZ1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4jz1] [4jz1_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4JZ1: [Tryp_SPc ] by SMART

Other resources with information on 4JZ1

Community annotation for 4JZ1 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---