4K7T Structure of the ternary complex of bacitracin, zinc, and geranyl-pyrophosphate date
authors Economou, N.J., Loll, P.J.
compound source
symmetry
R_factor
R_Free 0.1493
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.10
ligand DAS, DGL, DPN, GPP, NA, ORD, ZN enzyme
Primary referenceHigh-resolution crystal structure reveals molecular details of target recognition by bacitracin., Economou NJ, Cocklin S, Loll PJ, Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14207-12. doi:, 10.1073/pnas.1308268110. Epub 2013 Aug 12. PMID:23940351
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (13 Kb) [Save to disk]
  • Biological Unit Coordinates (4k7t.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 4K7T
  • CSU: Contacts of Structural Units for 4K7T
  • Structure Factors (48 Kb)
  • Retrieve 4K7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4K7T from S2C, [Save to disk]
  • Re-refined 4k7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4K7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4K7T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4K7T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4k7t] [4k7t_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4K7T
  • Community annotation for 4K7T at PDBWiki (http://pdbwiki.org)

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