4KA3 Structure of MAP kinase in complex with a docking peptide date 2013-04-22
authors Xin, F.J., Wu, J.W.
compound source
symmetry
R_factor
R_Free 0.2673
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.71
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the p38alpha MAP kinase in complex with a docking peptide from TAB1., Xin F, Wu J, Sci China Life Sci. 2013 May 31. PMID:23722236
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (4ka3.pdb1.gz) 116 Kb
  • CSU: Contacts of Structural Units for 4KA3
  • Structure Factors (90 Kb)
  • Retrieve 4KA3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KA3 from S2C, [Save to disk]
  • Re-refined 4ka3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4KA3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4KA3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KA3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1c4ka3, region A:570-730 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ka3_B] [4ka3_A] [4ka3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4KA3: [S_TKc ] by SMART
  • Other resources with information on 4KA3
  • Community annotation for 4KA3 at PDBWiki (http://pdbwiki.org)

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