4L0Y Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 1) date 2013-06-01
authors Tahirov, T.H.
compound source
symmetry
R_factor
R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructural basis of Ets1 activation by Runx1., Shrivastava T, Mino K, Babayeva ND, Baranovskaya OI, Rizzino A, Tahirov TH, Leukemia. 2014 Mar 20. doi: 10.1038/leu.2014.111. PMID:24646888
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4l0y.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 4L0Y
  • Structure Factors (319 Kb)
  • Retrieve 4L0Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4L0Y from S2C, [Save to disk]
  • Re-refined 4l0y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4L0Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4L0Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4L0Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4l0y_B] [4l0y] [4l0y_D] [4l0y_C] [4l0y_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4L0Y: [ETS ] by SMART
  • Other resources with information on 4L0Y
  • Community annotation for 4L0Y at PDBWiki (http://pdbwiki.org)

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