4L1B Crystal Structure of p110alpha complexed with niSH2 of p85alpha date
authors Zhang, J., Zhao, Y.L., Chen, Y.Y., Huang, M., Jiang, F.
compound source
symmetry
R_factor
R_Free 0.2742
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.59
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein serine/threonine kin...
  • protein kinase activator act...


  • Primary referenceCrystal Structures of PI3Kalpha Complexed with PI103 and Its Derivatives: New Directions for Inhibitors Design., Zhao Y, Zhang X, Chen Y, Lu S, Peng Y, Wang X, Guo C, Zhou A, Zhang J, Luo Y, Shen Q, Ding J, Meng L, Zhang J, ACS Med Chem Lett. 2013 Dec 10;5(2):138-42. doi: 10.1021/ml400378e. eCollection, 2014 Feb 13. PMID:24900786
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (4l1b.pdb1.gz) 210 Kb
  • LPC: Ligand-Protein Contacts for 4L1B
  • CSU: Contacts of Structural Units for 4L1B
  • Structure Factors (418 Kb)
  • Retrieve 4L1B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4L1B from S2C, [Save to disk]
  • Re-refined 4l1b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4L1B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4L1B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4L1B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4l1b] [4l1b_A] [4l1b_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4L1B: [C2] [PI3K_C2] [PI3K_p85B] [PI3K_rbd] [PI3Ka] [PI3Kc] [SH2 ] by SMART
  • Other resources with information on 4L1B
  • Community annotation for 4L1B at PDBWiki (http://pdbwiki.org)

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