4L2Y Crystal Structure of p110alpha complexed with niSH2 of p85alpha and compound 9d date
authors Zhang, J., Zhao, Y.L., Chen, Y.Y., Huang, M., Jiang, F.
compound source
symmetry
R_factor
R_Free 0.2705
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand GOL, SO4, XXK enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein serine/threonine kin...
  • protein kinase activator act...


  • Primary referenceCrystal Structures of PI3Kalpha Complexed with PI103 and Its Derivatives: New Directions for Inhibitors Design., Zhao Y, Zhang X, Chen Y, Lu S, Peng Y, Wang X, Guo C, Zhou A, Zhang J, Luo Y, Shen Q, Ding J, Meng L, Zhang J, ACS Med Chem Lett. 2013 Dec 10;5(2):138-42. doi: 10.1021/ml400378e. eCollection, 2014 Feb 13. PMID:24900786
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (443 Kb) [Save to disk]
  • Biological Unit Coordinates (4l2y.pdb1.gz) 437 Kb
  • LPC: Ligand-Protein Contacts for 4L2Y
  • CSU: Contacts of Structural Units for 4L2Y
  • Structure Factors (462 Kb)
  • Retrieve 4L2Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4L2Y from S2C, [Save to disk]
  • Re-refined 4l2y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4L2Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4L2Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4L2Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4l2y] [4l2y_B] [4l2y_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4L2Y: [C2] [PI3K_C2] [PI3K_p85B] [PI3K_rbd] [PI3Ka] [PI3Kc] [SH2 ] by SMART
  • Other resources with information on 4L2Y
  • Community annotation for 4L2Y at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science