4LCC Crystal structure of a human MAIT TCR in complex with a bacterial antigen bound to humanized bovine MR1 date
authors Lopez-Sagaseta, J., Adams, E.J.
compound source
symmetry
R_factor
R_Free 0.3124
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.26
ligand 1XL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C


Primary referenceMAIT Recognition of a Stimulatory Bacterial Antigen Bound to MR1., Lopez-Sagaseta J, Dulberger CL, McFedries A, Cushman M, Saghatelian A, Adams EJ, J Immunol. 2013 Nov 15;191(10):5268-77. doi: 10.4049/jimmunol.1301958. Epub 2013 , Oct 9. PMID:24108697
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (261 Kb) [Save to disk]
  • Biological Unit Coordinates (4lcc.pdb1.gz) 253 Kb
  • LPC: Ligand-Protein Contacts for 4LCC
  • CSU: Contacts of Structural Units for 4LCC
  • Structure Factors (177 Kb)
  • Retrieve 4LCC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LCC from S2C, [Save to disk]
  • Re-refined 4lcc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LCC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LCC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LCC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lcc_A] [4lcc_C] [4lcc_B] [4lcc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LCC: [IG_like] [IGc1] [IGv ] by SMART
    • Other resources with information on 4LCC
  • Community annotation for 4LCC at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science