4LGU Crystal structure of clAP1 BIR3 bound to T3226692 date
authors Dougan, D.R., Mol, C.D., Snell, G.P.
compound source
symmetry
R_factor
R_Free 0.21392
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand 1YH, ZN enzyme
Primary referenceDesign, stereoselective synthesis, and biological evaluation of novel tri-cyclic compounds as inhibitor of apoptosis proteins (IAP) antagonists., Asano M, Hashimoto K, Saito B, Shiokawa Z, Sumi H, Yabuki M, Yoshimatsu M, Aoyama K, Hamada T, Morishita N, Dougan DR, Mol CD, Yoshida S, Ishikawa T, Bioorg Med Chem. 2013 Sep 15;21(18):5725-37. doi: 10.1016/j.bmc.2013.07.020. Epub, 2013 Jul 18. PMID:23928071
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (4lgu.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (4lgu.pdb2.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 4LGU
  • CSU: Contacts of Structural Units for 4LGU
  • Structure Factors (260 Kb)
  • Retrieve 4LGU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LGU from S2C, [Save to disk]
  • Re-refined 4lgu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LGU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LGU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LGU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lgu] [4lgu_B] [4lgu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4LGU: [BIR ] by SMART
    • Other resources with information on 4LGU
  • Community annotation for 4LGU at PDBWiki (http://pdbwiki.org)

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