4LPZ Transcription date Jul 16, 2013
title Arnt Transcription Factorcoactivator Complex
authors Y.Guo, T.H.Scheuermann, K.H.Gardner
compound source
Molecule: Aryl Hydrocarbon Receptor Nuclear Translocator
Chain: A, B
Fragment: Pas 2 And Pac Domain Residues 356-470
Synonym: Arnt Protein, Class E Basic Helix-Loop-Helix Prote Bhlhe2, Dioxin Receptor, Nuclear Translocator, Hypoxia-Indu Factor 1-Beta, Hif-1-Beta, Hif1-Beta;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arnt, Bhlhe2
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Transforming Acidic Coiled-Coil-Containing Protei
Chain: C, D
Engineered: Yes
Mutation: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.245 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.846 59.816 73.510 90.00 97.85 90.00
method X-Ray Diffractionresolution 3.15 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (4lpz.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 4LPZ
  • Structure Factors (141 Kb)
  • Retrieve 4LPZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LPZ from S2C, [Save to disk]
  • Re-refined 4lpz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LPZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LPZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LPZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lpz_B] [4lpz_C] [4lpz_D] [4lpz_A] [4lpz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LPZ: [PAC] [PAS ] by SMART
  • Other resources with information on 4LPZ
  • Community annotation for 4LPZ at PDBWiki (http://pdbwiki.org)

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