4LTO Bacterial sodium channel in high calcium, I222 space group date 2013-07-23
authors Shaya, D., Findeisen, F., Abderemane-Ali, F., Arrigoni, C., Wong, S., Nurva, S.Reddy., Loussouarn, G., Minor, D.L.
compound source
symmetry
R_factor
R_Free 0.26803
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.46
ligand CA, NI enzyme
Gene MLG
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of a Prokaryotic Sodium Channel Pore Reveals Essential Gating Elements and an Outer Ion Binding Site Common to Eukaryotic Channels., Shaya D, Findeisen F, Abderemane-Ali F, Arrigoni C, Wong S, Nurva SR, Loussouarn G, Minor DL Jr, J Mol Biol. 2013 Oct 10. pii: S0022-2836(13)00636-0. doi:, 10.1016/j.jmb.2013.10.010. PMID:24120938
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (4lto.pdb1.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 4LTO
  • CSU: Contacts of Structural Units for 4LTO
  • Structure Factors (462 Kb)
  • Retrieve 4LTO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LTO from S2C, [Save to disk]
  • Re-refined 4lto structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LTO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LTO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LTO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lto_D] [4lto_B] [4lto_A] [4lto] [4lto_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LTO
  • Community annotation for 4LTO at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science