4M58	Crystal Structure of an transition metal transporter	date	2013-08-08
authors	Yu, Y., Yan, C.Y., Zhang, B., Li, X.L., Gu, J.K.
compound		source
symmetry		R_factor R_Free 0.2874
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.21
ligand	NI	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Planar substrate-binding site dictates the specificity of ECF-type nickel/cobalt transporters., Yu Y, Zhou M, Kirsch F, Xu C, Zhang L, Wang Y, Jiang Z, Wang N, Li J, Eitinger T, Yang M, Cell Res. 2014 Mar;24(3):267-77. doi: 10.1038/cr.2013.172. Epub 2013 Dec 24. PMID:24366337

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk] Biological Unit Coordinates (4m58.pdb1.gz) 71 Kb LPC: Ligand-Protein Contacts for 4M58 CSU: Contacts of Structural Units for 4M58 Structure Factors (213 Kb) Retrieve 4M58 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4M58 from S2C, [Save to disk] Re-refined 4m58 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4M58 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4M58

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4M58, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4m58] [4m58_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 4M58 at PDBWiki (http://pdbwiki.org)

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