4MDC	Transferase	date	Aug 22, 2013
title	Crystal Structure Of Glutathione S-Transferase From Sinorhiz Meliloti 1021, Nysgrc Target 021389
authors	I.G.Shabalin, P.Bacal, D.R.Cooper, M.Stead, M.Ahmed, J.Hammonds, J R.Seidel, S.C.Almo, W.Minor, New York Structural Genomics Rese Consortium (Nysgrc)
compound		source
Molecule: Putative Glutathione S-Transferase Chain: A, B, C, D Ec: 2.5.1.18 Engineered: Yes		Organism_scientific: Sinorhizobium Meliloti Organism_common: Ensifer Meliloti Organism_taxid: 266834 Strain: 1021 Gene: Gst4, R00327, Smc00407 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Psgc-His
symmetry	Space Group: C 1 2 1	R_factor 0.161 R_Free 0.190
crystal cell	length a length b length c angle alpha angle beta angle gamma 182.181 53.508 111.123 90.00 115.88 90.00
method	X-Ray Diffraction	resolution	1.78 Å
ligand	GOL, MSE	enzyme	Transferase E.C.2.5.1.18 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (345 Kb) [Save to disk] Biological Unit Coordinates (4mdc.pdb1.gz) 165 Kb Biological Unit Coordinates (4mdc.pdb2.gz) 164 Kb LPC: Ligand-Protein Contacts for 4MDC CSU: Contacts of Structural Units for 4MDC Structure Factors (1594 Kb) Retrieve 4MDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4MDC from S2C, [Save to disk] Re-refined 4mdc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MDC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4MDC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4MDC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mdc_A] [4mdc_B] [4mdc] [4mdc_D] [4mdc_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4MDC

Community annotation for 4MDC at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---