4MEE Crystal structure of the transport unit of the autotransporter AIDA-I from Escherichia coli date
authors Gawarzewski, I., Tschapek, B., Hoeppner, A., Smits, S.H., Jose, J., Schmitt, L.
compound source
symmetry
R_factor
R_Free 0.30639
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the transport unit of the autotransporter adhesin involved in diffuse adherence from Escherichia coli., Gawarzewski I, DiMaio F, Winterer E, Tschapek B, Smits SH, Jose J, Schmitt L, J Struct Biol. 2014 May 16. pii: S1047-8477(14)00109-9. doi:, 10.1016/j.jsb.2014.05.003. PMID:24841284
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (4mee.pdb1.gz) 90 Kb
  • CSU: Contacts of Structural Units for 4MEE
  • Structure Factors (187 Kb)
  • Retrieve 4MEE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MEE from S2C, [Save to disk]
  • Re-refined 4mee structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MEE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MEE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MEE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mee_A] [4mee]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MEE: [Autotransporter ] by SMART
  • Other resources with information on 4MEE
  • Community annotation for 4MEE at PDBWiki (http://pdbwiki.org)

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