4MI5 Crystal structure of the EZH2 SET domain date 2013-08-30
authors Antonysamy, S., Condon, B., Druzina, Z., Bonanno, J., Gheyi, T., Macewan, I., Zhang, A., Ashok, S., Russell, M., Luz, J.G.
compound source
symmetry
R_factor
R_Free 0.25671
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand SO4, ZN enzyme
Primary referenceStructural Context of Disease-Associated Mutations and Putative Mechanism of Autoinhibition Revealed by X-Ray Crystallographic Analysis of the EZH2-SET Domain., Antonysamy S, Condon B, Druzina Z, Bonanno JB, Gheyi T, Zhang F, Macewan I, Zhang A, Ashok S, Rodgers L, Russell M, Gately Luz J, PLoS One. 2013 Dec 19;8(12):e84147. doi: 10.1371/journal.pone.0084147. PMID:24367637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (4mi5.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 4MI5
  • CSU: Contacts of Structural Units for 4MI5
  • Structure Factors (143 Kb)
  • Retrieve 4MI5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MI5 from S2C, [Save to disk]
  • Re-refined 4mi5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MI5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MI5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MI5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mi5] [4mi5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4MI5: [CXC] [SET ] by SMART
    • Other resources with information on 4MI5
  • Community annotation for 4MI5 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science