4MND Crystal structure of Archaeoglobus fulgidus IPCT-DIPPS bifunctional membrane protein date
authors Nogly, P., Gushchin, I., Remeeva, A., Esteves, A.M., Ishchenko, A., Ma, P., Grudinin, S., Borges, N., Round, E., Moraes, I., Borshchevskiy, V., Santos, H., Gordeliy, V., Archer, M.
compound source
symmetry
R_factor
R_Free 0.30006
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.66
ligand LFA, MG enzyme
Gene AF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray structure of a CDP-alcohol phosphatidyltransferase membrane enzyme and insights into its catalytic mechanism., Nogly P, Gushchin I, Remeeva A, Esteves AM, Borges N, Ma P, Ishchenko A, Grudinin S, Round E, Moraes I, Borshchevskiy V, Santos H, Gordeliy V, Archer M, Nat Commun. 2014 Jun 19;5:4169. doi: 10.1038/ncomms5169. PMID:24942835
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4mnd.pdb1.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 4MND
  • CSU: Contacts of Structural Units for 4MND
  • Structure Factors (927 Kb)
  • Retrieve 4MND in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MND from S2C, [Save to disk]
  • Re-refined 4mnd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MND in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MND
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MND, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mnd] [4mnd_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MND
  • Community annotation for 4MND at PDBWiki (http://pdbwiki.org)

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