4MXF X-ray structure of the adduct between bovine pancreatic ribonuclease and Auoxo6, a dinuclear gold(III) complex with -dioxo bridges linking the two metal centers date 2013-09-26
authors Krauss, I.Russo., Vergara, A., Merlino, A.
compound source
symmetry
R_factor
R_Free 0.26848
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand AU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • ribonuclease A activity


    • Primary referenceInteractions of gold-based drugs with proteins: crystal structure of the adduct formed between ribonuclease A and a cytotoxic gold(iii) compound., Messori L, Scaletti F, Massai L, Cinellu MA, Russo Krauss I, di Martino G, Vergara A, Paduano L, Merlino A, Metallomics. 2013 Nov 29. PMID:24287583
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (4mxf.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (4mxf.pdb2.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 4MXF
  • CSU: Contacts of Structural Units for 4MXF
  • Structure Factors (235 Kb)
  • Retrieve 4MXF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MXF from S2C, [Save to disk]
  • Re-refined 4mxf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MXF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MXF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MXF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mxf_A] [4mxf_B] [4mxf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MXF: [RNAse_Pc ] by SMART
    • Other resources with information on 4MXF
  • Community annotation for 4MXF at PDBWiki (http://pdbwiki.org)

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