OCA Atlas for 4MZZ

4MZZ

Crystal structure of Bovine 3 Glu-Osteocalcin.

date

authors

Malashkevich, V.N., Dowd, T.L., Almo, S.C., NYSGRC, New.York.Structural.Genomics.Research.Consortium.

compound

source

symmetry

R_factor

R_Free

0.2446

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

1.88

Gene
Ontology

Chain	Function	Process	Component
A, B

Primary reference

X-ray crystal structure of bovine 3 Glu-osteocalcin., Malashkevich VN, Almo SC, Dowd TL, Biochemistry. 2013 Nov 26;52(47):8387-92. doi: 10.1021/bi4010254. Epub 2013 Nov, 12. PMID:24138653

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]

Biological Unit Coordinates (4mzz.pdb1.gz) 11 Kb

Biological Unit Coordinates (4mzz.pdb2.gz) 12 Kb

CSU: Contacts of Structural Units for 4MZZ

Structure Factors (104 Kb)

Retrieve 4MZZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4MZZ from S2C, [Save to disk]

Re-refined 4mzz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MZZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4MZZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 4MZZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mzz] [4mzz_A] [4mzz_B]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Domain found in 4MZZ: [GLA ] by SMART

Other resources with information on 4MZZ

Community annotation for 4MZZ at PDBWiki (http://pdbwiki.org)

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