4N32 Structure of langerin CRD with alpha-Me-GlcNAc. date 2013-10-06
authors Feinberg, H., Rowntree, T.J.W., Tan, S.L.W., Drickamer, K., Weis, W.I., Taylor, M.E.
compound source
symmetry
R_factor
R_Free 0.2333
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand 2F8, CA enzyme
Primary referenceCommon polymorphisms in human langerin change specificity for glycan ligands., Feinberg H, Rowntree TJ, Tan SL, Drickamer K, Weis WI, Taylor ME, J Biol Chem. 2013 Nov 11. PMID:24217250
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (4n32.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (4n32.pdb2.gz) 27 Kb
  • Biological Unit Coordinates (4n32.pdb3.gz) 26 Kb
  • Biological Unit Coordinates (4n32.pdb4.gz) 26 Kb
  • Biological Unit Coordinates (4n32.pdb5.gz) 50 Kb
  • Biological Unit Coordinates (4n32.pdb6.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4N32
  • CSU: Contacts of Structural Units for 4N32
  • Structure Factors (613 Kb)
  • Retrieve 4N32 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N32 from S2C, [Save to disk]
  • Re-refined 4n32 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4N32 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4N32
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N32, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n32] [4n32_A] [4n32_C] [4n32_D] [4n32_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N32: [CLECT ] by SMART
  • Other resources with information on 4N32
  • Community annotation for 4N32 at PDBWiki (http://pdbwiki.org)

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