4N33 Structure of langerin CRD complexed with GlcNAc-beta1-3Gal-beta1-4Glc-beta-CH2CH2N3 date
authors Feinberg, H., Rowntree, T.J.W., Tan, S.L.W., Drickamer, K., Weis, W.I., Taylor, M.E.
compound source
symmetry
R_factor
R_Free 0.2182
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand BGC, CA, GAL, NAG enzyme
Primary referenceCommon polymorphisms in human langerin change specificity for glycan ligands., Feinberg H, Rowntree TJ, Tan SL, Drickamer K, Weis WI, Taylor ME, J Biol Chem. 2013 Nov 11. PMID:24217250
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (4n33.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (4n33.pdb2.gz) 27 Kb
  • Biological Unit Coordinates (4n33.pdb3.gz) 26 Kb
  • Biological Unit Coordinates (4n33.pdb4.gz) 26 Kb
  • Biological Unit Coordinates (4n33.pdb5.gz) 49 Kb
  • Biological Unit Coordinates (4n33.pdb6.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4N33
  • CSU: Contacts of Structural Units for 4N33
  • Structure Factors (515 Kb)
  • Retrieve 4N33 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N33 from S2C, [Save to disk]
  • Re-refined 4n33 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4N33 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4N33
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N33, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n33_A] [4n33_D] [4n33_C] [4n33] [4n33_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N33: [CLECT ] by SMART
    • Other resources with information on 4N33
  • Community annotation for 4N33 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science