4N35 Structure of langerin CRD I313 complexed with GlcNAc-beta1-3Gal-beta1-4Glc-beta-CH2CH2N3 date
authors Feinberg, H., Rowntree, T.J.W., Tan, S.L.W., Drickamer, K., Weis, W.I., Taylor, M.E.
compound source
symmetry
R_factor
R_Free 0.2118
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand BGC, CA, GAL, NAG enzyme
Primary referenceCommon polymorphisms in human langerin change specificity for glycan ligands., Feinberg H, Rowntree TJ, Tan SL, Drickamer K, Weis WI, Taylor ME, J Biol Chem. 2013 Nov 11. PMID:24217250
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (4n35.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (4n35.pdb2.gz) 26 Kb
  • Biological Unit Coordinates (4n35.pdb3.gz) 26 Kb
  • Biological Unit Coordinates (4n35.pdb4.gz) 27 Kb
  • Biological Unit Coordinates (4n35.pdb5.gz) 50 Kb
  • Biological Unit Coordinates (4n35.pdb6.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4N35
  • CSU: Contacts of Structural Units for 4N35
  • Structure Factors (345 Kb)
  • Retrieve 4N35 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N35 from S2C, [Save to disk]
  • Re-refined 4n35 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4N35 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4N35
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N35, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n35_B] [4n35_A] [4n35_C] [4n35_D] [4n35]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N35: [CLECT ] by SMART
  • Other resources with information on 4N35
  • Community annotation for 4N35 at PDBWiki (http://pdbwiki.org)

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