4NEF X-ray structure of human Aquaporin 2 date 2013-10-29
authors Frick, A., Eriksson, U., Mattia, F.D., Oberg, F., Hedfalk, K., Neutze, R., Grip, W.D., Deen, P.M.T., Tornroth-horsefield, S.
compound source
symmetry
R_factor
R_Free 0.2251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.75
ligand CD, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceX-ray structure of human aquaporin 2 and its implications for nephrogenic diabetes insipidus and trafficking., Frick A, Eriksson UK, de Mattia F, Oberg F, Hedfalk K, Neutze R, de Grip WJ, Deen PM, Tornroth-Horsefield S, Proc Natl Acad Sci U S A. 2014 Apr 29;111(17):6305-10. doi:, 10.1073/pnas.1321406111. Epub 2014 Apr 14. PMID:24733887
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (307 Kb) [Save to disk]
  • Biological Unit Coordinates (4nef.pdb1.gz) 301 Kb
  • LPC: Ligand-Protein Contacts for 4NEF
  • CSU: Contacts of Structural Units for 4NEF
  • Structure Factors (519 Kb)
  • Retrieve 4NEF in mmCIF format [Save to disk]
  • Re-refined 4nef structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NEF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NEF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NEF, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nef_A] [4nef_B] [4nef_C] [4nef_D] [4nef]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4NEF
  • Community annotation for 4NEF at PDBWiki (http://pdbwiki.org)

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