4NFA Structure of the C-terminal doamin of Knl1 date 2013-10-31
authors Petrovic, A., Mosalaganti, S., Keller, J., Mattiuzzo, M., Overlack, K., Wohlgemuth, S., Pasqualato, S., Raunser, S., Musacchio, A.
compound source
symmetry
R_factor
R_Free 0.2416
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand CL, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceModular Assembly of RWD Domains on the Mis12 Complex Underlies Outer Kinetochore Organization., Petrovic A, Mosalaganti S, Keller J, Mattiuzzo M, Overlack K, Krenn V, De Antoni A, Wohlgemuth S, Cecatiello V, Pasqualato S, Raunser S, Musacchio A, Mol Cell. 2014 Feb 20;53(4):591-605. doi: 10.1016/j.molcel.2014.01.019. Epub 2014, Feb 13. PMID:24530301
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (4nfa.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 4NFA
  • CSU: Contacts of Structural Units for 4NFA
  • Structure Factors (109 Kb)
  • Retrieve 4NFA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NFA from S2C, [Save to disk]
  • Re-refined 4nfa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NFA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4NFA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NFA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nfa_A] [4nfa]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4NFA
  • Community annotation for 4NFA at PDBWiki (http://pdbwiki.org)

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