4NKQ Structure of a Cytokine Receptor Complex date
authors Parker, M.W., Broughton, S.E.
compound source
symmetry
R_factor
R_Free 0.2729
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
ligand NAG enzyme
note 4NKQ supersedes 3CXE
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


Primary referenceThe structure of the GM-CSF receptor complex reveals a distinct mode of cytokine receptor activation., Hansen G, Hercus TR, McClure BJ, Stomski FC, Dottore M, Powell J, Ramshaw H, Woodcock JM, Xu Y, Guthridge M, McKinstry WJ, Lopez AF, Parker MW, Cell. 2008 Aug 8;134(3):496-507. PMID:18692472
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (255 Kb) [Save to disk]
  • Biological Unit Coordinates (4nkq.pdb1.gz) 247 Kb
  • LPC: Ligand-Protein Contacts for 4NKQ
  • CSU: Contacts of Structural Units for 4NKQ
  • Structure Factors (417 Kb)
  • Retrieve 4NKQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NKQ from S2C, [Save to disk]
  • Re-refined 4nkq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NKQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4NKQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nkq_A] [4nkq] [4nkq_B] [4nkq_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4NKQ: [CSF2] [FN3 ] by SMART
    • Other resources with information on 4NKQ
  • Community annotation for 4NKQ at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science