4NM7 Crystal structure of GSK-3/Axin complex bound to phosphorylated Wnt receptor LRP6 e-motif date 2013-11-14
authors Stamos, J.L., Chu, M.L.H., Enos, M.D., Shah, N., Weis, W.I.
compound source
symmetry
R_factor
R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand ADP, CL, DTT, GOL, MG, SEP enzyme
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6., Stamos JL, Chu ML, Enos MD, Shah N, Weis WI, Elife. 2014 Mar 18;3:e01998. doi: 10.7554/eLife.01998. PMID:24642411
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (4nm7.pdb1.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 4NM7
  • CSU: Contacts of Structural Units for 4NM7
  • Structure Factors (272 Kb)
  • Retrieve 4NM7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NM7 from S2C, [Save to disk]
  • Re-refined 4nm7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NM7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NM7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NM7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nm7_A] [4nm7_C] [4nm7] [4nm7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NM7: [S_TKc ] by SMART
  • Other resources with information on 4NM7
  • Community annotation for 4NM7 at PDBWiki (http://pdbwiki.org)

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